Pairwise Alignments

Query, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 260 a.a., lysine/arginine/ornithine transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 9/248 (3%)

Query: 9   ISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIE-DGEFKGFEVELIYEISKRLD 67
           I  + L+V       +  A  + + +G  T  AP S  +  G+F GF+++L  E+ KR+ 
Sbjct: 5   ILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQ 64

Query: 68  LQPEFVVYSFSELLDAVSEGEVDCGIGYIGKTPERQLKMDFS-RPYGYTYSTILVRSDSN 126
           ++  +V   F  L+ ++   ++D  I  +  T +RQ ++ FS + Y      I  +    
Sbjct: 65  VKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPI 124

Query: 127 CVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFKIIIYENQNDINNDLLSGKIDSEVTDH 186
              +  L+ K VGVL+ S +E +     +S    ++ Y NQ+ + +DL +G++D+ + D 
Sbjct: 125 QPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDE 184

Query: 187 ITSL--YLIQDYDTELKIVGD-----KFDIIYVAIAIDNTNPELKKSIDVALLEMENDGT 239
           + +   +L Q    +    G      K+      + +   + EL  + + AL E+  DGT
Sbjct: 185 VAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGT 244

Query: 240 LVKLKEKW 247
             K+ +K+
Sbjct: 245 YDKMAKKY 252