Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 194 a.a., Phage integrase, site-specific serine recombinase from Sphingobium sp. HT1-2

 Score =  132 bits (331), Expect = 5e-36
 Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 1/180 (0%)

Query: 1   MIIGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIV 60
           M+IGYARVST +Q+L  QLD L+ AG E+ F +K SG K NR    +     RAGD+++V
Sbjct: 1   MLIGYARVSTSEQDLTPQLDALRDAGCERTFSDKASGAKANRAGLAEALSHARAGDVLVV 60

Query: 61  TELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEFERDLI 120
            +L R+ R+ K LV++       G+ ++S+ +  +DT  A GKL+F I A +AE ERDL 
Sbjct: 61  WKLDRLGRTMKGLVDLAAELAENGIGLRSITDG-IDTAGAAGKLVFHILAAMAEMERDLN 119

Query: 121 SERVKSGLNAARSRGRLGGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFTLYNYL 180
            ER  + L  AR  GR+GGR  + + K   A +   +   TI++I    G+S  TLY +L
Sbjct: 120 RERTTAALIVARREGRVGGRKTVMTPKRLEAARKLLASGMTIREIAPTIGVSVPTLYRHL 179