Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 183 a.a., Phage DNA invertase from Sphingobium sp. HT1-2

 Score =  127 bits (318), Expect = 1e-34
 Identities = 76/181 (41%), Positives = 106/181 (58%), Gaps = 3/181 (1%)

Query: 2   IIGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIVT 61
           +IGYARVST DQ L  QLD L  A  ++IF +  S  K +RP   +    LR GD ++V 
Sbjct: 3   LIGYARVSTADQKLSLQLDALNTAECDRIFDDHASEAKADRPGLTEALAYLRPGDTLVVW 62

Query: 62  ELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEFERDLIS 121
           +L R+ RS   L+E V    + G+  +SL E+ +DTT++ G L+F IF  LA+FERDLI 
Sbjct: 63  KLDRLGRSMSHLIEKVGELAARGIGFRSLTEN-IDTTTSGGMLVFNIFGSLAQFERDLIR 121

Query: 122 ERVKSGLNAARSRGRLGG-RPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFTLYNYL 180
           ER  +GL AAR RG  GG RP +  +K+  A + + +   T+++      I K  LY  L
Sbjct: 122 ERTHAGLKAARERGNKGGRRPVVTPDKLRKA-RAHIAAGLTVREAAARLKIGKTALYKAL 180

Query: 181 E 181
           E
Sbjct: 181 E 181