Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 186 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  115 bits (289), Expect = 3e-31
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 9/186 (4%)

Query: 3   IGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIVTE 62
           IGY RVST DQN++RQLD       ++IF +K SG   NRPE D M    R GD ++V  
Sbjct: 6   IGYVRVSTFDQNVDRQLDG---QSLDRIFTDKASGKDINRPELDAMLAFAREGDTVVVHS 62

Query: 63  LTRISRSTKDLVEIVESCKSLGVEIKSLKES--WLDTTSAHGKLLFTIFAGLAEFERDLI 120
           + R++R+  DL ++V+S    GV I+ +KES  +    S    L+ ++    AEFER LI
Sbjct: 63  MDRLARNLDDLRKLVQSLTKRGVRIEFVKESLAFSGEDSPMANLMLSVMGAFAEFERALI 122

Query: 121 SERVKSGLNAARSRGRLGGRPKIDSEKV--EMALKMYDSKEYTIKQILKATGISKFTLYN 178
            ER + G+  AR RG   GR +  S+++  E+  ++ D +   +  I +  GIS+ TLY 
Sbjct: 123 RERQREGIAVARQRGAYRGRKRSLSDEIVAELHRRVDDGERKAV--IARDLGISRETLYQ 180

Query: 179 YLEKRT 184
           YL   T
Sbjct: 181 YLRAAT 186