Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 193 a.a., Serine recombinase, PinQ/PinR-type from Sphingobium sp. HT1-2

 Score =  100 bits (249), Expect = 2e-26
 Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 10/185 (5%)

Query: 2   IIGYARVSTKDQNLERQLDELKKAG----SEKIFLEKISGTKR--NRPEFDKMFDILRAG 55
           I  Y RVST DQ  + Q+ E+  AG     ++I  E +SG+     R  +  +   L AG
Sbjct: 4   IFAYCRVSTIDQTTDNQMLEIAGAGFTVEPQRIIAETVSGSVAAVERKGWQLLLHKLEAG 63

Query: 56  DIIIVTELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEF 115
           D++IVT+L R+ R+  D+ + VE   ++GV +  L    +D TSA GK+  ++   +AEF
Sbjct: 64  DVLIVTKLDRLGRNAMDVRQTVERLAAMGVRVHCLALGGVDLTSAAGKMTMSVIIAVAEF 123

Query: 116 ERDLISERVKSGLNAARSRGR-LGGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKF 174
           ERDL+ ER  +GL  A+++G+ LG + K D + V         +  TI Q ++  GISK 
Sbjct: 124 ERDLLVERTNAGLQRAKAQGKALGPKRKADGQTV---AAWRADRGATISQTMEHFGISKA 180

Query: 175 TLYNY 179
           ++  +
Sbjct: 181 SVMRF 185