Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 196 a.a., Qin prophage; predicted site-specific recombinase (NCBI) from Escherichia coli BW25113

 Score = 99.8 bits (247), Expect = 3e-26
 Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 6/157 (3%)

Query: 2   IIGYARVSTKDQNLERQLDELKKAG----SEKIFLEKISGTKRN--RPEFDKMFDILRAG 55
           I  Y R+ST DQ  E Q  E++ AG     ++I  E ISG+     RP F+++   L+ G
Sbjct: 4   IFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCG 63

Query: 56  DIIIVTELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEF 115
           D +IVT+L R+  +  D+ + VE     G+ +  L    +D TS  GK++  + + +AEF
Sbjct: 64  DQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEF 123

Query: 116 ERDLISERVKSGLNAARSRGRLGGRPKIDSEKVEMAL 152
           ERDL+ ER  SG+  AR  G+  GRP + +E+ + A+
Sbjct: 124 ERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAV 160