Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 534 a.a., Site-specific recombinases, DNA invertase Pin homologs from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 5   YARVSTKDQ--------NLERQLDEL---KKAGSEKIFLEKISGTKRNRPEFDKMFDILR 53
           Y RVST +Q        N E  L +     K     +  E  S    NRP + ++   L+
Sbjct: 8   YIRVSTDEQADKGYSQRNQEEMLRKYCINNKIEIRNVVYEDHSAKSFNRPRWKELIQSLK 67

Query: 54  ----AGDIIIVTELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIF 109
               + ++++ T+  R SR+  D  +++   + LGVE +++++  LD      K++   +
Sbjct: 68  KRKNSVNLVLFTKWDRFSRNAGDAYQMINVLRRLGVEPQAIEQP-LDLEIPENKMMLAFY 126

Query: 110 AGLAEFERDLISERVKSGLNAARSRGR-LGGRPKIDSEKVEMALKMYDSKEYTIKQILK 167
               E E D  +  V  G+  A+  GR +G  P     K +   K Y + +    +ILK
Sbjct: 127 LAAPEVENDRRALNVFYGMRRAKKEGRYMGLAPVAYVNKSDEYGKKYIAPKEPDAEILK 185