Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 434 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)

Query: 158 ALIVRVLWE-TGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDYI 216
           AL +  LW  TGCRR E  ++++ + D ++G   + D+KT +      +   + +    +
Sbjct: 258 ALAIARLWALTGCRRDEIAALKWSEVDLDRGLLVLEDSKTGK------SVRPLGVAARVL 311

Query: 217 KENIKRDSND-YIFQNE----MIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIVIH 271
            E +  D +  ++F  E      Q  KR        V+ K V K K  GV P       H
Sbjct: 312 LEALPCDPHSPFVFPAEHGDGHYQGTKR--------VWPKVVEKAKLPGVTP-------H 356

Query: 272 SLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
           +LRH   +  +  G  + +   ILGH +  +T  Y+H
Sbjct: 357 TLRHTMGSTAVSSGEALMLTGAILGHANARSTSLYAH 393