Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 337 a.a., Integron integrase IntI1 from Sphingobium sp. HT1-2

 Score = 60.8 bits (146), Expect = 4e-14
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 34/182 (18%)

Query: 159 LIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRD---- 214
           L  ++L+ TG R SE L +R KD DF+ G   +R+ K  ++R +++ E     +R+    
Sbjct: 135 LFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSR 194

Query: 215 ----YIKENIKRDSNDYI---FQNEMIQNGKRVKLDWI---------------------T 246
               ++K+  +  S   +    + +  + G      W+                      
Sbjct: 195 ARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYD 254

Query: 247 NVFKKAVRKLKEEGVIPEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYY 306
             F++A ++  E+  I   K    H+LRH  AT LL  G  I  V+++LGH  + TT+ Y
Sbjct: 255 QTFQRAFKRAVEQAGIT--KPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIY 312

Query: 307 SH 308
           +H
Sbjct: 313 TH 314