Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 292 a.a., integrase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 31/296 (10%)

Query: 24  NIYIKKFQEEREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTT-----HDFVIFFN 78
           +++ K  Q E+ +    P T+ +  T L  F A+ +++    Y +T      H  +  + 
Sbjct: 2   DLFFKYLQYEKRYS---PHTLTSYHTDLGQFAAYLQQV----YDITDAAEADHTIIRSWI 54

Query: 79  MLNNRRNCTVRTQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDT 138
           +   + N   R+ NR    L+ +YR L  +  +  +   + R +  K  KK    +  + 
Sbjct: 55  LTLVQNNIKPRSINRKIACLRSYYRFL--LAQERVKVNPMLRIKAPKATKKLPAFVQEEP 112

Query: 139 YNRIIKEIILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYE 198
           +N ++      ++    RD L +  L+ TG R +E ++I   D +      R+   K  +
Sbjct: 113 FNNLLDSFSFEDTFEGQRDRLTLEFLYGTGIRLAELINIEPSDIEERAKTVRVLG-KGNK 171

Query: 199 ERTVVIAEETVEIVRDYIKENIKRDSNDYIFQNEMIQ-----NGKRVKLDWITNVFKKAV 253
           ER V + +  +  +  Y     K + + ++  N  ++      G+ +   ++  V KK +
Sbjct: 172 ERIVPLNDSLLLALDAY-----KTEKSHFLGDNNSVKLLVTNKGRPLYPKFVYRVVKKYI 226

Query: 254 RKLKEEGVIPEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSHS 309
                  +I   +    H LRH  AT LL+KG  ++ +K++LGH SL  T  Y+H+
Sbjct: 227 ------SLITTSEHNSPHVLRHSFATHLLNKGADLNAIKDLLGHASLAATQVYTHN 276