Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 300 a.a., Tyrosine recombinase XerC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 19/273 (6%)

Query: 39  IKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLNNRRNCTVRTQNRYFNLL 98
           + P T+ N    L   +A   E G + +       V  F + + R+     +     + L
Sbjct: 23  LSPITLLNYQRQLDAIIALAGETGLKSWQQCDAAIVRSFAVRSRRKGLGPASLALRLSAL 82

Query: 99  KVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRIIKEIILSNSRTRLRDA 158
           + F+  L  V+  E +    +     K  +     I+ D  NR++   I  N    +RD 
Sbjct: 83  RSFFDWL--VSQGELKANPAKGVSAPKAPRHLPKNIDVDDVNRLLD--IDLNDPLAVRDR 138

Query: 159 LIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDYIK- 217
            ++ V++  G R SE + +  K  D + G   +   K  +ER + I    V  +  ++  
Sbjct: 139 AMLEVMYGAGLRLSELVGLDIKHLDLDTGEVWVMG-KGSKERRLPIGRNAVTWIEHWLDL 197

Query: 218 ENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEG--KRIVIHSLRH 275
             +     + +F +++   GKR+          + V+K   E  I +G    +  H LRH
Sbjct: 198 RGLFASDEEALFLSKL---GKRISA--------RNVQKRFAEWGIKQGLNSHVHPHKLRH 246

Query: 276 GRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
             AT +L+    +  V+E+LGH +L TT  Y+H
Sbjct: 247 SFATHMLESSGDLRGVQELLGHANLSTTQIYTH 279