Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 298 a.a., tyrosine recombinase XerC from Escherichia coli ECRC62

 Score = 66.2 bits (160), Expect = 9e-16
 Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 22/286 (7%)

Query: 26  YIKKFQEEREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLNNRRN 85
           Y++    ER+   + P T+ N    L+  + F  E G + +       V  F + + R+ 
Sbjct: 11  YLRYLSVERQ---LSPITLLNYQRQLEAIINFASENGLQSWQQCDVTVVRNFAVRSRRKG 67

Query: 86  CTVRTQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRIIKE 145
               +     + L+ F+  L  V+  E +    +     K  +     I+ D  NR++  
Sbjct: 68  LGAASLALRLSALRSFFDWL--VSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDI 125

Query: 146 IILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIA 205
            I  N    +RD  ++ V++  G R SE + +  K  D E G   +   K  +ER + I 
Sbjct: 126 DI--NDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMG-KGSKERRLPIG 182

Query: 206 EETVEIVRDYIK-ENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPE 264
              V  +  ++   ++    +D +F +++   GKR+          + V+K   E  I +
Sbjct: 183 RNAVAWIEHWLDLRDLFGSEDDALFLSKL---GKRISA--------RNVQKRFAEWGIKQ 231

Query: 265 G--KRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
           G    +  H LRH  AT +L+    +  V+E+LGH +L TT  Y+H
Sbjct: 232 GLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTH 277