Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 19/161 (11%)

Query: 155 LRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRD 214
           LRD  ++ +L+ TG R SE + +   D    +G  R+   K  +ER V + EE V  +  
Sbjct: 134 LRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIG-KGNKERLVPLGEEAVYWLEQ 192

Query: 215 YIKENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVR-----KLKEEGVIP--EGKR 267
           Y++           +    + NG+ + + + +N  ++  R     ++K    +   +  +
Sbjct: 193 YLE-----------YSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNK 241

Query: 268 IVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
           +  H LRH  AT LL+ G  + VV+ +LGH  L TT  Y+H
Sbjct: 242 LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTH 282