Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 327 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 27/165 (16%)

Query: 159 LIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDYIKE 218
           +++R+L+ TG R  EAL ++ +D + E G  RI+D+K  ++R + I+     + ++Y+  
Sbjct: 141 VLLRLLYATGIRIGEALDLKDEDVNLEDGYIRIQDSKNKKQRAIPISASLNLVCKEYLSY 200

Query: 219 N----IKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIP-----EGKRIV 269
                 K  +  + F N        V  +     F+K  RK  E   IP      G R  
Sbjct: 201 RAWLPYKNSTTGFFFVN--------VSGNKCGQGFRKWFRKCLEHANIPYLGEKHGPR-- 250

Query: 270 IHSLRH--------GRATDLLDKGVPIDVVKEILGHRSLETTLYY 306
           IH LRH        G A   +D    + ++   LGH+S+  T +Y
Sbjct: 251 IHDLRHTFAVNSLAGMAEAGIDLYASLPILSNYLGHQSIGATDHY 295