Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 337 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 56/249 (22%), Positives = 115/249 (46%), Gaps = 6/249 (2%)

Query: 68  LTTHDFVIFFNMLNNRRNCTVRTQNRYFNLLKVFYRLLKYVNFKE-FERESIERKRFSKF 126
           +T    V F + + + R C+  T+N     +  FYR L+Y +    +E + I   R  K 
Sbjct: 59  ITKETIVAFLDWIQSERKCSNSTRNLRLAAIHSFYRYLQYQHLDNLYECQRILSIRSKKT 118

Query: 127 EKKHYDTINFDTYNRIIKEIILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEK 186
            K     ++ +    ++++   +  + R R+  ++ ++++TG R  E + +       +K
Sbjct: 119 AKDSIKYLSVEGIRLLLQQPDTTTRKGR-RNLALLALMYDTGARVQEIIDLTPSMLRLDK 177

Query: 187 GRFRIRDTKTYEERTVVIAEETVEIVRDYIKENIKRDSNDYIFQNEMIQNGKRVKLD--W 244
                   K  + R V + +     +++Y+KE      +  ++   +  N K+ KL    
Sbjct: 178 PATIKIIGKGNKARLVPMLDAQTVHLKNYLKEYELDSPSAKLYP--LFSNSKKEKLTRAG 235

Query: 245 ITNVFKKAVRKLKEEGVIPEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTL 304
           I  + +K V   ++E  +    +I  HS RH +A  LL  GV +  +++ILGH S++TT 
Sbjct: 236 INYIIQKYVGMARKENKLMIPLKITCHSFRHTKAMHLLQAGVNLVYIRDILGHVSVQTTE 295

Query: 305 YYSHSKERK 313
            Y+ +  ++
Sbjct: 296 IYARADSKQ 304