Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 301 a.a., tyrosine recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 24/292 (8%)

Query: 26  YIKKFQE----EREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLN 81
           +IK+F+     ER       S  + D+  L  F+      G  P +   +    F + L 
Sbjct: 8   HIKQFEYYLKIERSLSKNSISAYRRDMEKLSAFMKDAFP-GITPLTTQLNHLRAFVSELA 66

Query: 82  NRRNCTVRTQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNR 141
           +    +  TQ R  + +K F++ + Y +  + E +        K  +K  DT++++   +
Sbjct: 67  SL-GISEYTQARVISGVKAFFKFMVYED--KLEEDPAILLEAPKLGRKLPDTLSYEEIVK 123

Query: 142 IIKEIILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERT 201
           +++ I L       R+  ++ VL+ +G R SE + ++      + G  RI   K  +ER 
Sbjct: 124 LLEGIKLGTPEGH-RNRAMLEVLYSSGLRVSELVELKLGMVYSDIGFLRILG-KGNKERL 181

Query: 202 VVIAEETVEIVRDYIKE-----NIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKL 256
           V + ++ +  ++ Y+ E      I     +Y+F N   + GK++    +    KK V   
Sbjct: 182 VPVGKDALRYLKLYLDEVRNHQKIAPGHEEYVFLN---RRGKKMTRVMVFIFIKKLV--- 235

Query: 257 KEEGVIPEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
           +E G+    K++  H+ RH  AT L++ G  +  V+E+LGH S+ TT  Y+H
Sbjct: 236 EEVGI---KKKVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTH 284