Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 8/224 (3%)

Query: 90  TQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRIIKEIILS 149
           T NR    L+ FY+ L  +   E  ++   + R  K  KK  + +   T ++++ ++   
Sbjct: 67  TVNRKMATLRSFYKFL--LRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLNDLEYE 124

Query: 150 NSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETV 209
                 RD +++  L+ TG R SE + + +KD D +    ++   K  ++R + +    +
Sbjct: 125 AGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQGKTVKVYG-KRKKQRIIPLTNTLI 183

Query: 210 EIVRDYIKENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIV 269
           E +  Y K+  +  SN       ++   K+     I     + VRK  +  +  +  +  
Sbjct: 184 ENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMI---IYRIVRKYLD--LFAQTSKRS 238

Query: 270 IHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSHSKERK 313
            H LRH  AT LL+KG  ++ VK++LGH +L  T  Y+H+   K
Sbjct: 239 PHLLRHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEK 282