Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 293 a.a., site-specific recombinase, phage integrase family/ribosomal subunit interface protein from Bacteroides ovatus ATCC 8483

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 18/287 (6%)

Query: 26  YIKKFQEEREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLNNRRN 85
           ++   Q ER +          D+  L+ F    EE GK        + +  + +    + 
Sbjct: 6   FLDYLQYERNYSEKTVLAYGEDIKQLQEFAQ--EEYGKFNPLEVEAELIREWIVSLMDKG 63

Query: 86  CTVRTQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRIIKE 145
            T  + NR  + L+ FY+ L  +   E   + + + +  K +K     +  +  NR++ E
Sbjct: 64  YTSTSVNRKLSSLRTFYKYL--LRQGETTIDPLRKIKGPKNKKPLPVFLKENEMNRLLDE 121

Query: 146 IILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIA 205
                     RD LI+ V + TG R SE + +  KD DF     ++   K  ++R +   
Sbjct: 122 TDFGEGFKGCRDRLIIEVFYATGMRLSELIGLDNKDVDFSASLLKVTG-KRNKQRLIPFG 180

Query: 206 EETVEIVRDYIK---ENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVI 262
           +E  E++ +YI    E I   S  +  +    +NG+R+  + + N+ K+ + K      +
Sbjct: 181 DELQELMLEYINVRNETIPERSEAFFIR----ENGERLYKNLVYNLVKRNLSK------V 230

Query: 263 PEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSHS 309
              K+   H LRH  AT +L+    + VVKE+LGH S+ TT  Y+H+
Sbjct: 231 ATLKKKSPHVLRHTFATTMLNNEAELGVVKELLGHESITTTEIYTHA 277