Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 298 a.a., site-specific tyrosine recombinase from Escherichia coli BL21

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 19/219 (8%)

Query: 97  LLKVFYRLLKYVNFKEFERESIERKRFS-KFEKKHYDTINFDTYNRIIKEIILSNSRTRL 155
           LL    RL +Y+  ++F  +       S K  ++    ++     R+++  ++      L
Sbjct: 75  LLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQP-LEL 133

Query: 156 RDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDY 215
           RD  ++ VL+ TG R SE + +   D    +G  R+   K  +ER V + EE V  +  Y
Sbjct: 134 RDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIG-KGNKERLVPLGEEAVYWLETY 192

Query: 216 IKEN----IKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIP--EGKRIV 269
           ++      +   S D +F ++  Q   R    W          ++K   V+   + +++ 
Sbjct: 193 LEHGRPWLLNGVSIDVLFPSQRAQQMTRQTF-W---------HRIKHYAVLAGIDSEKLS 242

Query: 270 IHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
            H LRH  AT LL+ G  + VV+ +LGH  L TT  Y+H
Sbjct: 243 PHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTH 281