Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 306 a.a., Tyrosine recombinase XerC from Acinetobacter radioresistens SK82

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 69/295 (23%), Positives = 121/295 (41%), Gaps = 41/295 (13%)

Query: 32  EEREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLNNRRNCTVRTQ 91
           +ERE  N    T+      +K FL FC        S+   D   +  +   R   +  + 
Sbjct: 14  KEREIQNQSAHTLSAYARDVKDFLDFCAVKKLPLNSIEASDLREYLALKVEREQLSSSSL 73

Query: 92  NRYFNLLKVFYRLLK---YVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRIIKEII- 147
            R+ + ++ F +  +   Y+ F   +   ++R+      +     I+ +T  +I+ +   
Sbjct: 74  QRHLSAIRQFMKWAEQGQYLGFNPADDFQLKRQ-----PRPLPGMIDIETVQQILDQPAP 128

Query: 148 --LSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIA 205
             L +    LRD  ++ +L+ +G R +E  S+  KD DF +   RI   K  + R V   
Sbjct: 129 EKLQDQHLWLRDKAMLELLYSSGLRLTELQSLCMKDIDFNRRLLRITG-KGNKTRIVPFG 187

Query: 206 EETVEIVRDYIKE------NIKRDSNDYIFQN------EMIQNGKRVKLDWITNVFKKAV 253
            +  E +  +++           DS  +I Q         I+N  RVKL        +A+
Sbjct: 188 TQAYESLLKWLEVYRLWQGQFNADSAVFISQKGGQLGPRQIEN--RVKL--------QAL 237

Query: 254 RKLKEEGVIPEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
           R      + P       H LRH  A+ +L     +  V+E+LGH +L TT  Y+H
Sbjct: 238 RAGVNIDLHP-------HLLRHCFASHMLSNSGDLRAVQEMLGHSNLSTTQIYTH 285