Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 396 a.a., Elongation factor Tu from Xanthobacter sp. DMC5

 Score = 50.1 bits (118), Expect = 9e-11
 Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 133 IPEVEKSSDF-IKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRIY---PTNNKAMVKS 188
           IP+ E+  D    +PI+  FS+   GTV+ G+V++G + V + + I    PT  K  V  
Sbjct: 202 IPQPERPIDLPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIRPT-VKTTVTG 260

Query: 189 VQVHDRDVKEAETNSRVGLSLKGISVDDLDRGMILSN-GDLEVSDKIELE 237
           V++  + + + +    VG+ L+G   +D++RG ++   G ++   K + E
Sbjct: 261 VEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVVCKPGSVKPHTKFKAE 310



 Score = 23.5 bits (49), Expect = 0.009
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 88  VERGFIVVGEYVDVEQLKGIISNT 111
           VERG I VGE V++  ++  +  T
Sbjct: 234 VERGIIKVGEEVEIVGIRPTVKTT 257