Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 397 a.a., Translation elongation factor Tu from Variovorax sp. SCN45

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 20/200 (10%)

Query: 120 EKDYIQIREKMIT-IPEVEKSSD-FIKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRI 177
           E+  +++ E + T IP  E++ D    +P++  FS+   GTV+ G V++G + V + + I
Sbjct: 188 EEAIMKLAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGAVERGVIKVGEEIEI 247

Query: 178 Y---PTNNKAMVKSVQVHDRDVKEAETNSRVGLSLKGISVDDLDRGMILSN-GDLEVSDK 233
               PT  K     V++  + + + +    VG+ L+G   ++++RG +L   G ++    
Sbjct: 248 VGIRPT-VKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLCKPGSIKPHTH 306

Query: 234 IELEM---------KWNPYMN--KEVAVGEGYQIIVGLQTVSCKIEEKNGN--KLTLKLL 280
              E+         +  P+ N  +         +   ++    K     G+   +T+KL+
Sbjct: 307 FTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVSITVKLI 366

Query: 281 KPAAFEKGDKFIMLDGSAKI 300
            P A E+G +F + +G   +
Sbjct: 367 NPIAMEEGLRFAIREGGRTV 386