Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 43/281 (15%)

Query: 2   KNVTIGLFGDFEDAGKNIA-------------------KKGTSTDITLYNHKNGDDSAVF 42
           KN+ +G+FG  +     ++                   K+G + DI     K  +     
Sbjct: 4   KNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITL 63

Query: 43  VEPTRYPERIQPLIYTINMMDYALVFIDE---IKPEIGETLLTLDLFGVERGFIVV-GEY 98
           V+   + + I+ ++   +++D AL+ +D     K + GE +L LD F +    ++   + 
Sbjct: 64  VDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDN 123

Query: 99  VDVEQ-------LKGIISNT-SMKNFEFL----------EKDYIQIREKMITIPEVEKSS 140
              E+       +K I+ +T ++KN   +          E+    I   +     +  + 
Sbjct: 124 AGTEEIKRTEMIMKSILQSTQNLKNSSIIPISAKTGFGVEELKNLIINTLNNAEIIRNTE 183

Query: 141 DFIKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRIYPTNNKAMVKSVQVHDRDVKEAE 200
            + K+P+DH F +K  GTV+ G ++KG V V D L++ P N    V+S+Q     V EA+
Sbjct: 184 SYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMSTKVRSIQCFKESVMEAK 243

Query: 201 TNSRVGLSLKGISVDDLDRGMILSNGD--LEVSDKIELEMK 239
              RVG++++G+    + RG IL++ D  L+  DKI  ++K
Sbjct: 244 AGDRVGMAIQGVESKQIYRGCILTSKDTKLQTVDKIVAKIK 284