Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 614 a.a., selenocysteine-specific translation elongation factor from Escherichia coli ECRC62

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 7/182 (3%)

Query: 126 IREKMITIPEVEKSSDF-IKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRIYPTNNKA 184
           +RE ++ +PE E +S    ++ ID  F+VK  G V+ G    G V V D+L +   N   
Sbjct: 157 LREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPM 216

Query: 185 MVKSVQVHDRDVKEAETNSRVGLSLKG-ISVDDLDRG-MILSNGDLEVSDKIELEMKWNP 242
            V+++   ++  + A    R+ L++ G    + ++RG  +L++   E   ++ +E++ + 
Sbjct: 217 RVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHT 276

Query: 243 YMNKEVAVGEGYQIIVGLQTVSCKIEEKNGNKLTLKLLKPAAFEKGDKFIMLDGSAKIRI 302
            + +     +   I      V+ ++     N   L    P      D+ ++ D SA+  +
Sbjct: 277 PLTQ----WQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTL 332

Query: 303 IG 304
            G
Sbjct: 333 AG 334