Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 614 a.a., selenocysteinyl-tRNA-specific translation factor from Escherichia coli BL21

 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 126 IREKMITIPEVEKSSDF-IKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRIYPTNNKA 184
           +RE ++ +PE E +S    ++ ID  F+VK  G V+ G    G V V D+L +   N   
Sbjct: 157 LREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPM 216

Query: 185 MVKSVQVHDRDVKEAETNSRVGLSLKG-ISVDDLDRG 220
            V+++   ++  + A    R+ L++ G    + ++RG
Sbjct: 217 RVRALHAQNQPTETAHAGQRIALNIAGDAEKEQINRG 253