Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 89/436 (20%), Positives = 185/436 (42%), Gaps = 13/436 (2%)

Query: 19  YVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAII 78
           ++ P +    +    G ++GI++G+ +G + LA V+  FP++    ++ + +GAG+S +I
Sbjct: 16  FLAPMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIVFFFIALVIGLGAGASVLI 75

Query: 79  SISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKNLESYVVGYSK 138
             + G ++      I    LT   L+ ++    G L   P +  +    ++    VGY++
Sbjct: 76  GQAWGAQETAMVKAITGATLTLGALVGVVAAVLGSLFARPALQALGTPVDVLDDAVGYAQ 135

Query: 139 IIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIVVF----NFGVMG 194
            ++L     +  I    +LR        ++ L + ++  ++L   LI  +      G+  
Sbjct: 136 KMMLIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGLLLTPALIRGWVGLPPMGIQS 195

Query: 195 AAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPF----LEFSLIKRIAKTGFSPFIMEL 250
           A  A ++   L ++L+L   L  K++V            L+  ++ ++ + G    +  +
Sbjct: 196 AVYAGLVGNAL-AMLFLILRLRHKNHVMAPDRELLAALRLDRVILGKVLRIGLPTGLQMV 254

Query: 251 AFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHGAKKFN 310
              +  +V       +GS    +AYG V  I +++    L I+     L +   GA +  
Sbjct: 255 VLSLSELVILALVNGHGSQA-TAAYGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLE 313

Query: 311 RVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIATTTIGLEIHNFAILIM 370
           R+  IL+  + +N  L     +      + L+ +F   D   +    + L I  ++IL+ 
Sbjct: 314 RIGPILRTGLLINTCLTGGLIVLGYVLSHWLLGLFITDDAARVNAEHL-LHIMLWSILVF 372

Query: 371 GVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIKGIWWA--TVFSEYLS 428
           G   V+     A+    +   +S+   L   LP   LL  + G++G+W A    +   L+
Sbjct: 373 GFQAVIGGIMRASGVVLMPVVISIFCVLCVELPMAYLLNAHFGLEGVWMAFPVTYLAMLA 432

Query: 429 FIITIYFITKEFKKIK 444
                Y +    K+IK
Sbjct: 433 LQTAYYRLVWRHKQIK 448