Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 484 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 68/348 (19%), Positives = 145/348 (41%), Gaps = 25/348 (7%)

Query: 12  INNLMIRYVIPSIAGTVIIGIYGI-----IDGIFIGRTIGAEGLAGVTFSFPVLIAISSI 66
           ++  ++R+V   +AGT  IG+  +     I+  +I      E  A V F+  V    +S+
Sbjct: 16  VSGSLMRHVCV-MAGTGAIGLIAVFAVDLINLFYISLLGEKETAAAVGFAGVVGFFHASL 74

Query: 67  GVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLS 126
            + +  G +A++S ++G      A  I  ++L  ++ +S++        + P +  +   
Sbjct: 75  CIGLTIGIAAVVSRTVGAGRMDDARRIGTSSLVLMVALSVLAGTGTAFFLHPALQALGAQ 134

Query: 127 KNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV 186
                    Y  + +         ++   +LR+ G  ++SM +    +    +LD +LI 
Sbjct: 135 GETARLAHRYLSVTVHTLPLLGIGMATSALLRSVGDARRSMTVTLAGAFVTAVLDPILIF 194

Query: 187 VFNFGVMGAAAATVL------AQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAK 240
            F  G+ GAA + V+      A GL  +L     L      ++G ++        + +  
Sbjct: 195 GFGLGLDGAAISAVVSRTALAALGLHGVLVKHRMLGPFQASRLGADA--------RALGS 246

Query: 241 TGFSPFIMELA--FGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQP 298
                 +  LA   G   + H +   ++G S  V+    +  +T   + +   +S  V P
Sbjct: 247 VAGPAVLTNLATPVGAAFVTHAV--AQFGPSA-VAGAATIDRLTPVAFGLVYALSGAVGP 303

Query: 299 LISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFN 346
           +++ N GA ++ RV E L+ ++         ++L +     LL++ F+
Sbjct: 304 ILAQNLGAGQYRRVQEGLRASLLFMVASVAVAWLLLALGQGLLVRAFS 351