Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 495 a.a., predicted multidrug efflux system (RefSeq) from Escherichia coli BW25113

 Score = 58.2 bits (139), Expect = 6e-13
 Identities = 53/243 (21%), Positives = 114/243 (46%), Gaps = 14/243 (5%)

Query: 21  IPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAIISI 80
           +P       + + G++   F+   +G + +AGV  +    + I +    I  G++ +++ 
Sbjct: 47  VPIFMENACVLLMGVLS-TFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAF 105

Query: 81  SLGKKDYKKASCILKTALT----YIILISLIITCFGYLLIDPVISFMNLSKNLESYVVGY 136
           SLGK+D ++A    + +L     + +L++ +I  FG  +ID V    + +  +++  + Y
Sbjct: 106 SLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAG--DATTEVKALALTY 163

Query: 137 SKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV-VFNF---GV 192
            ++ +L   A    +     LR  G  K  ++I   +++ NII+  +LI  +F++   G 
Sbjct: 164 LELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGF 223

Query: 193 MGAAAATVLAQGLGSILYLKHFLSG-KSNVKIGKNSPF--LEFSLIKRIAKTGFSPFIME 249
           +GA     +++ +G++  L     G    ++I   S F  L FS+I  +   G    +  
Sbjct: 224 VGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVES 283

Query: 250 LAF 252
           + F
Sbjct: 284 VLF 286