Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 536 a.a., putative efflux protein, MATE family from Enterobacter asburiae PDN3

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 54/243 (22%), Positives = 113/243 (46%), Gaps = 14/243 (5%)

Query: 21  IPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAIISI 80
           +P       + + G++   F+   +G E +AGV  +    + + S    I  G++ +++ 
Sbjct: 99  VPIFLENTCVLLMGVLS-TFLVSWLGKEAMAGVGLADSFNMVVISFFAAIDLGTTVVVAF 157

Query: 81  SLGKKDYKKASCILKTALTYIILISLIITC----FGYLLIDPVISFMNLSKNLESYVVGY 136
           SLGK D K+A    + +L  + + S+++      FG  +ID V      +  ++   + Y
Sbjct: 158 SLGKLDPKRAREAARQSLMIMTIFSIVLAAVIHYFGREIIDFVAG--EATNEVKDLALTY 215

Query: 137 SKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV-VFNF---GV 192
            ++ +L   A   A+     LR  G  K  ++I   M++ NII+  +LI  VF++   G 
Sbjct: 216 LEMTVLSYPAAAIALIGSGALRGAGNTKIPLLINGGMNILNIIISSVLIYGVFSWEGLGF 275

Query: 193 MGAAAATVLAQGLGSILYLKHFLSG-KSNVKIGKNSPF--LEFSLIKRIAKTGFSPFIME 249
           +GA     +++ +G++  +   ++G   ++++   S F    F++I  +   G    I  
Sbjct: 276 VGAGLGLTISRYIGAVAIIGVLMAGITPSLRLTLKSYFRPFNFAIIWEVMGIGIPASIES 335

Query: 250 LAF 252
           + F
Sbjct: 336 VLF 338



 Score = 28.1 bits (61), Expect = 7e-04
 Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 10/203 (4%)

Query: 21  IPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAIISI 80
           IP+   +V+     ++  +F+   +G + +AG   +F +   I+  G  +G+ S+ I   
Sbjct: 329 IPASIESVLFNGGKLLTQMFVAG-MGTDVIAGNFIAFSIASLINLPGNALGSASTIITGK 387

Query: 81  SLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKNLESYVVGYSKII 140
            LGK    +A   L+    ++  I L +  +G     P    M      E  V    KI+
Sbjct: 388 RLGKGQIGQAERQLRHVF-WLSTIGLTLIAWG---TAPFAGLMASFYTHEDDVKEVVKIL 443

Query: 141 IL--GAIAQIFAIS--LDPILRNDGFPKKSMIILAL-MSVFNIILDYMLIVVFNFGVMGA 195
           I    A   I+A S  L   L+     + +M +  L M    ++  Y L V+  +GV+G 
Sbjct: 444 IWLNAAFMPIWAASWVLPAGLKGARDARFAMWVSMLGMWGCRVVAGYTLGVMLGWGVVGV 503

Query: 196 AAATVLAQGLGSILYLKHFLSGK 218
                L   +   L+    +SG+
Sbjct: 504 WLGMFLDWAVRGALFYWRMVSGR 526