Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 497 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Sphingobium sp. HT1-2

 Score =  221 bits (564), Expect = 3e-62
 Identities = 124/334 (37%), Positives = 200/334 (59%), Gaps = 11/334 (3%)

Query: 14  LTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYT 73
           L+VSEL+  +K T+E+ F   R  ++GEIS      SGH+Y  LKD+N+ +D VM+K   
Sbjct: 27  LSVSELSGLLKRTVEDRFGHVR--LRGEISGFKRAASGHLYLALKDDNAVLDGVMWKGGA 84

Query: 74  KKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLF 133
           ++L F P +G+ VI  GK++ Y    KYQ   + ME  G G L    +KLK KL +EGLF
Sbjct: 85  QRLAFQPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKLKAKLAAEGLF 144

Query: 134 NEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTV-- 191
           N + K+++P  P+ IG++TSPTGA IRDI+    +R     ++++P +VQG+ AA+ +  
Sbjct: 145 NRDRKRRLPFLPRTIGVVTSPTGAVIRDILHRLADR-CPTQVLLWPVLVQGQGAAEQIAR 203

Query: 192 -ISGISELN---KLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETD 247
            + G S ++    L + DL+I+ARGGGS+EDLW FN E + RA+ E   P I+ +GHETD
Sbjct: 204 AVRGFSAMDGSGPLPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAECSIPTISAVGHETD 263

Query: 248 FTISDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDILYS 307
            T+ D+ +D+RA TP+ AAE+A+    EL +M+  +       ++         LD+   
Sbjct: 264 TTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLGEMGLRSGRAVRRGAMQARERLDMQAR 323

Query: 308 KIEKNSPKSKIEKQKVHVDKIRAQMNHEIKNKIS 341
            +   +P + +  Q+  +D +   +N  ++++++
Sbjct: 324 LMP--TPDTLLAPQRQRLDLLSDGLNSGLRHRLA 355