Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 443 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  230 bits (586), Expect = 7e-65
 Identities = 127/412 (30%), Positives = 218/412 (52%), Gaps = 26/412 (6%)

Query: 16  VSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYTKK 75
           V  L   V  TL   F      ++GE+S  +   SGH YF+LKD+   + C MF+    +
Sbjct: 32  VGPLMRAVADTLSARF--NPVAVRGELSGFSRAASGHCYFSLKDDTGQVRCAMFRRSADQ 89

Query: 76  LDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLFNE 135
           L F+P +G  V  +GK+ +Y   G  Q     ++  G G LF +F KLK +LE+EGLF E
Sbjct: 90  LSFAPRDGQLVEARGKLDVYGARGDLQLIVESLQPAGQGALFEQFLKLKAQLEAEGLFEE 149

Query: 136 EYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTVISGI 195
             K+ +P  P++IGI+TS   AA+RD++   + R   + + IYP+ VQG  AA  + + +
Sbjct: 150 ARKRPLPAQPRSIGIVTSLGAAALRDVVTALKRRVPHIPVAIYPSAVQGMQAAAELCTAL 209

Query: 196 SELNKLE----KIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTIS 251
               +      + +++++ RGGGS+EDLW FN+ +L R I ++  PV+ G+GHETDFT++
Sbjct: 210 QTAYRRHADTGESEVLLLVRGGGSLEDLWSFNDPALVRTIAQAPMPVVCGVGHETDFTLA 269

Query: 252 DFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIEK 311
           DFV+DLRA TP+ AAE+    + + +  ++ L+  L + M  +I  R   LD L  ++ +
Sbjct: 270 DFVADLRAPTPTAAAELCAPTQVQRQGELSYLQERLNDGMYRDIDQRGQRLDRLTQRLGR 329

Query: 312 NSPK------------------SKIEKQKVH--VDKIRAQMNHEIKNKISYEVKRFEKSY 351
            S +                    +  Q+ H  +  ++ ++   ++  +  + +R ++  
Sbjct: 330 PSGRIHDSQRQLASLQHALQRSGSLALQRHHNGLQTLQVRLPQALQRALEMQRQRLQRGQ 389

Query: 352 SLLNAYNPLNVLNKGYSIIQDENEKIISSKSSLNLENDVKITLKDGTVDAHI 403
           + L   +P  VL +GY+ + DE    ++  +       ++ TL DG +D  +
Sbjct: 390 TALGLLDPQLVLQRGYAFLTDEQGMALTRAAQARPGQALRATLADGALDVRV 441