Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 456 a.a., exonuclease VII, large subunit from Escherichia coli BL21

 Score =  274 bits (700), Expect = 4e-78
 Identities = 137/366 (37%), Positives = 228/366 (62%), Gaps = 2/366 (0%)

Query: 6   LESSFSNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAID 65
           L S      TVS LN  V+  LE +  + +  I GEISN T   SGH YFTLKD+ + + 
Sbjct: 2   LPSQSPAIFTVSRLNQTVRLLLEHE--MGQVWISGEISNFTQPASGHWYFTLKDDTAQVR 59

Query: 66  CVMFKPYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKE 125
           C MF+   +++ F P  G  V+++  ++LY   G YQ     M+  G G L  K+++LK 
Sbjct: 60  CAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKA 119

Query: 126 KLESEGLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGE 185
           KL++EGLF+++YK+ +P     +G+ITS TGAA+ DI+ V + R+ S+ +IIYPA VQG+
Sbjct: 120 KLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGD 179

Query: 186 SAAKTVISGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHE 245
            A   ++  I   N+  + D++I+ RGGGS+EDLW FN+E +ARAIF S+ PV++ +GHE
Sbjct: 180 DAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSAVGHE 239

Query: 246 TDFTISDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDIL 305
           TD TI+DFV+DLRA TPS AAE+   N+ EL   + +  + L+  M   ++NR+     +
Sbjct: 240 TDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQI 299

Query: 306 YSKIEKNSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNK 365
           + ++++  P+ ++ +Q+  +++++ +M+  ++N++    ++ ++    LN  NP   +++
Sbjct: 300 HHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHR 359

Query: 366 GYSIIQ 371
             + IQ
Sbjct: 360 AQTRIQ 365