Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 532 a.a., exodeoxyribonuclease VII large subunit from Agrobacterium fabrum C58

 Score =  217 bits (552), Expect = 8e-61
 Identities = 116/291 (39%), Positives = 181/291 (62%), Gaps = 10/291 (3%)

Query: 15  TVSELNSYVKSTLEEDFLLKRACIKGEISNCT-LHKSGHVYFTLKDENSAIDCVMFKPYT 73
           +VSEL+  +K T+E  F  ++  ++GEIS     H SGH YF+LKD+ + ID V++K   
Sbjct: 17  SVSELSGSIKRTVETAF--EQVRVRGEISGYRGPHSSGHAYFSLKDDRARIDAVIWKGTF 74

Query: 74  KKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLF 133
            +L F P EGM VI  GK++ +  + KYQ     +E  G G L    +  + +L +EGLF
Sbjct: 75  SRLKFRPEEGMEVIATGKITTFPGSSKYQIVIESLEPAGAGALMALLEDRRRRLAAEGLF 134

Query: 134 NEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTVIS 193
           +   K+ +P  P+ IG++TSPTGA IRDI+    +R   V+++++P  VQGE + + V +
Sbjct: 135 DSARKRPLPFMPRVIGVVTSPTGAVIRDILHRISDR-FPVHVVVWPVKVQGEGSGEEVAN 193

Query: 194 GISELNKLE------KIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETD 247
            I   N L+      + D++I+ARGGGS+EDLW FN+E + RA  ES+ P+I+ +GHETD
Sbjct: 194 AIRGFNALKPGGDIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAESEIPLISAVGHETD 253

Query: 248 FTISDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNR 298
            T+ D+ +D+RA TP+ AAE+A+    EL++ ++ L   L   +  ++ NR
Sbjct: 254 TTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQMDNR 304



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 20/88 (22%), Positives = 44/88 (50%)

Query: 317 KIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEK 376
           ++E+QK  V     + +  + ++++           +L + +  NVLN+GY++I+DE  +
Sbjct: 413 QLERQKERVVTAARRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENR 472

Query: 377 IISSKSSLNLENDVKITLKDGTVDAHIT 404
            ++  +++     V +   DG V A  T
Sbjct: 473 PLTRAAAIASGAAVSMEFADGRVSAITT 500