Pairwise Alignments

Query, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

Subject, 613 a.a., excinuclease ABC subunit UvrC from Rhodanobacter sp000427505 FW510-R12

 Score =  299 bits (765), Expect = 2e-85
 Identities = 191/550 (34%), Positives = 303/550 (55%), Gaps = 40/550 (7%)

Query: 4   ISDIPKNPGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIV 63
           +  +  +PG Y + + +G ++YVGKA NLKKRV SYF K   +P+   +V  I  +E  V
Sbjct: 15  VRTLTTSPGVYRHFDAAGELLYVGKAGNLKKRVGSYFLKPRMEPRIAAMVAQIARVEITV 74

Query: 64  TDNEVEALILENTLIKKYSPKYNIDLKDSKNYAYIYISE-ENFPRIGISRN-KSKKGKFY 121
           T  E EAL+LE+ LIK   P+YNI L+D K+Y YIY+S  E++PR+   R  K+  G+++
Sbjct: 75  TRTEGEALLLESQLIKSLKPRYNILLRDDKSYPYIYLSTGEDYPRLAFHRGAKNLPGRYF 134

Query: 122 GPFTSAKERDYVLDVLKKTFKIRSCKNMH----KRPCLRHHIKNCTAPCSGDITSKDYLN 177
           GP+ S       L++++K FK+R C++ +     RPCL + I  C+APC G I+ +DY N
Sbjct: 135 GPYPSVYAVRESLNLMQKLFKVRQCEDSYFRNRTRPCLLYQIGRCSAPCVGLISVEDYRN 194

Query: 178 QIKKAEHILKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVK 237
            ++ AE  L+G  +++I EL   M + SK LQFE A  +R+++ A+ +L+ + +V +   
Sbjct: 195 DVRHAEMFLEGRSNAVIDELAEAMEQASKALQFERAAKLRDQVAALRQLQAQHHV-QGAS 253

Query: 238 YNEDVISILEKSGKLHIMVFNVLKG-TLFDRKYFE----FDYTENFFEEFLIQYYSENDV 292
            + DV++   ++G   + V     G +L  R +F          +   +F+ QYY +  V
Sbjct: 254 ADMDVLACRIEAGMACVSVLFFRDGISLGTRDFFPRLPLDAEPADVLAQFITQYYLDRPV 313

Query: 293 PSEIIISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIKNLEI 352
           P E+I+ E   + E          L E L ++ G  V  K   +GE+ Q L +A +N + 
Sbjct: 314 PRELILGEPLADQE---------ILAELLGQQAGHAVDLKSSVRGERAQFLQMAERNAQA 364

Query: 353 YVNGNEIKVQSLKNK-------LMLDKSPNIIECFDISHLSGTSTVGSVVQFRNGKPDKK 405
            +       Q+L  +       L LD+SP  IECFDISH  G  TV S V F    P+K 
Sbjct: 365 SLTARLASRQTLGTRFDDLQKVLGLDESPRRIECFDISHTMGELTVASCVVFGPEGPEKS 424

Query: 406 NYRRFKIKTVSGIDDFKSISEVVFRRYSKLLEENLELPDLIIIDGGKGQLSSAFSELRKL 465
           +YRRF I  ++  DD+ ++ + + RR+ KL E     PD+++IDGG GQ++ A   LR+L
Sbjct: 425 HYRRFNITGITPGDDYAAMHQALTRRFRKLAEGEGARPDVLLIDGGSGQVAQALGVLREL 484

Query: 466 KLK-IPLISIAK------REEEIYTPGIENPLPIKK-----NEKASLFIQEIRDEAHRFA 513
            +  I ++ +AK       EE +    +E+  P ++     +  A   +  +RDEAHRFA
Sbjct: 485 GVDGIEVVGVAKGPGRRAGEETLVLARLESGSPGRELHPGSSSPALHLVAAVRDEAHRFA 544

Query: 514 INYNRLLRKK 523
           I+ +R  R+K
Sbjct: 545 ISGHRKRREK 554