Pairwise Alignments

Query, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

Subject, 610 a.a., excinuclease ABC subunit UvrC from Dickeya dianthicola ME23

 Score =  270 bits (690), Expect = 1e-76
 Identities = 178/553 (32%), Positives = 289/553 (52%), Gaps = 45/553 (8%)

Query: 4   ISDIPKNPGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIV 63
           +  +   PG Y   + S TVIYVGKAK+LKKR+SSYF  +    KTE LVKSI +++  +
Sbjct: 11  LKTVTSQPGVYRMYDASDTVIYVGKAKDLKKRLSSYFRAQVASRKTEALVKSIRQIDVTI 70

Query: 64  TDNEVEALILENTLIKKYSPKYNIDLKDSKNYAYIYISEENFPRIGISRN-KSKKGKFYG 122
           T  E EAL+LE+  IK+Y P+YN+ L+D K+Y  +++S +  PR+ + R  K  KG+++G
Sbjct: 71  THTETEALLLEHNYIKRYQPRYNVLLRDDKSYPMVFLSGDTHPRLSVHRGAKHAKGEYFG 130

Query: 123 PFTSAKERDYVLDVLKKTFKIRSCKNM----HKRPCLRHHIKNCTAPC-SGDITSKDYLN 177
           PF +       L +L+K F IR C+N       RPCL++ I  C  PC SG ++ ++Y  
Sbjct: 131 PFPNGNAVRETLLLLQKLFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVSGLVSEEEYQQ 190

Query: 178 QIKKAEHILKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVK 237
           Q++     L G    ++  L   M   S  L+FE+A  IR++I A+ R+  +Q V  D  
Sbjct: 191 QVEYVRLFLSGKDQQVLTRLIRRMETASGELRFEDAARIRDQIQAVRRVTEKQFVSGDGD 250

Query: 238 YNEDVISILEKSGKLHIMVFNVLKG-TLFDRKYFE--------FDYTENFFEEFLIQYYS 288
            + DVI +   +G   + V  + +G  L  R YF          +  + F  +F +Q   
Sbjct: 251 -DLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELAEVVQTFVGQFYLQGSV 309

Query: 289 ENDVPSEIIIS-ELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAI 347
              +PS+I++   LP++            L E L+++ G K+  +   +G++ + L LA 
Sbjct: 310 SRTLPSDILLDFSLPEH----------QLLAESLTEQAGRKIQIQTRPRGDRARYLKLAR 359

Query: 348 KNLEIYVNGNEIKVQSLKNKL------MLDKSPNIIECFDISHLSGTSTVGSVVQFRNGK 401
            N    +     +  +++ +L      +  +  + +ECFDISH  G  TV S V F    
Sbjct: 360 TNAHTALTTKLSQQSTVQQRLTALAAVLGIEKIHRMECFDISHTMGEQTVASCVVFNADG 419

Query: 402 PDKKNYRRFKIKTVSGIDDFKSISEVVFRRYSKLLEENLELPDLIIIDGGKGQLSSAFSE 461
           P +  YRR+ I  ++  DD+ ++++V+ RRY K ++E  ++PD+I+IDGGKGQL+ A   
Sbjct: 420 PLRSEYRRYNIAGITPGDDYAAMNQVLRRRYGKSIDEG-KIPDVIVIDGGKGQLAQAKDV 478

Query: 462 LRKL-----KLKIPLISIAKRE------EEIYTPGIENPLPIKKNEKASLFIQEIRDEAH 510
              L     K +  L+ +AK        E ++       + +  +  A   IQ IRD++H
Sbjct: 479 FASLQVPWDKSRPLLLGVAKGSDRKAGLETLFFEATGEGMALPADSPALHVIQHIRDDSH 538

Query: 511 RFAINYNRLLRKK 523
             AI+ +R  R K
Sbjct: 539 NHAISGHRKQRAK 551