Pairwise Alignments

Query, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

Subject, 599 a.a., UvrABC system protein C from Acinetobacter radioresistens SK82

 Score =  314 bits (804), Expect = 7e-90
 Identities = 189/538 (35%), Positives = 306/538 (56%), Gaps = 42/538 (7%)

Query: 11  PGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIVTDNEVEA 70
           PG Y    + G ++YVGKAKNLK RVSSYF K    PKT+ LV  IY+++ ++T +E EA
Sbjct: 20  PGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIYDIQTLITRSETEA 79

Query: 71  LILENTLIKKYSPKYNIDLKDSKNYAYIYISEEN-FPRIGISRNKSKK--GKFYGPFTSA 127
           L+LE  LIK + P YNI L+D K+Y YI++S +  +PR+   R K K   GKF+GP+ SA
Sbjct: 80  LLLEQNLIKLHRPPYNIMLRDDKSYVYIFVSSDKPYPRVASGRGKGKHQVGKFFGPYPSA 139

Query: 128 KERDYVLDVLKKTFKIRSCKNMH----KRPCLRHHIKNCTAPCSGDITSKDYLNQIKKAE 183
                 L VL+K F +R C+N +    KRPCL++ IK C+APC G ++ +DY   +K   
Sbjct: 140 YSARDTLVVLEKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLVSPEDYQEDVKNTI 199

Query: 184 HILKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVKYNEDVI 243
             L+G+   L  EL  +M E ++ L+FE+A+  R+ +  +  ++ +Q V + VK   D++
Sbjct: 200 RFLQGDTKELNQELIAKMEEAAEKLEFEKAVFYRDRLGLLREVQAQQAVYK-VKGEADIL 258

Query: 244 SILEKSGKLHIMVFNVLKGTLFDRK-YF---EFDYTENFFEEFLIQYYSE--NDVPSEII 297
           +I  ++G   + + +V  G +   K YF   + D       +F+  +Y +  ++VP+E+I
Sbjct: 259 AIAYQAGVTCVQIMHVRNGRMLGGKSYFPDMQNDDLGQMLSDFMANFYFQVADEVPAELI 318

Query: 298 ISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIKNLEIYVNG- 356
           ++    N +E         L + +  + G KV  K   +  + +  +LA+ N++  + G 
Sbjct: 319 VNVALPNTQE---------LEQAIQTEFGKKVQIKHKVRETRAEWQELAVMNVQHAIKGQ 369

Query: 357 --NEIKVQSLKNKL--MLDKSPNIIECFDISHLSGTSTVGSVVQFRNGKPDKKNYRRFKI 412
             N +++    ++L  ++ +  + IECFDISH  G + + S V F  G   K++YR+F I
Sbjct: 370 LSNHLELHERFHQLEQVMGRPIDRIECFDISHTMGEAPIASCVVFDQGGARKRDYRQFAI 429

Query: 413 KTVSGIDDFKSISEVVFRRYSKLLEENLELPDLIIIDGGKGQLSSAFSELRKLKLKIPLI 472
           + ++G DD+ ++ + + RRY K L     LPDL++IDGGKGQL  A   ++ L L   ++
Sbjct: 430 QDITGGDDYAAMRQALTRRYKKSL-----LPDLLLIDGGKGQLHMAMEVMQDLGLDAFMV 484

Query: 473 SIAKREEEIYTPGIE-------NPLPIKKNEKASLFIQEIRDEAHRFAINYNRLLRKK 523
            ++K E     PG+E         + + ++ KA   IQ++RDEAHRFAI  +R  R K
Sbjct: 485 GVSKGEGR--KPGLETLHFTDGRKIQLAEDHKALHLIQQVRDEAHRFAITRHRAKRDK 540