Pairwise Alignments

Query, 646 a.a., excinuclease ABC subunit UvrB from Methanococcus maripaludis S2

Subject, 427 a.a., ATP-dependent RNA helicase RhlE (EC 3.6.4.13) from Variovorax sp. SCN45

 Score = 48.1 bits (113), Expect = 8e-10
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 17/152 (11%)

Query: 444 ERVLITTLTKRLAEELTEYLAKRNVKARYLHSDIDTIERTEIIRNLRLGKFDCLVGINLL 503
           +RVL+   T+  A+ + E L K  + A   H DI    RT+I+   +  ++D ++  +L 
Sbjct: 249 DRVLVFVATQHAAQTVAEKLYKNGIYAVPFHGDIAQGTRTDILAQFKQSRWDVVIATDLA 308

Query: 504 REGLDIPEVGFVGILDADKEGFLRNDKSLIQTIGRAARNANSKVVLYAGKMTDSIKKAVS 563
             G+DI ++  V   D       R+    I  IGR  R   S + +       S   A S
Sbjct: 309 ARGIDIAQLPVVINYDLP-----RSPTDYIHRIGRTGRAGESGLAI-------SFVSAAS 356

Query: 564 ET-----ERRRKLQKEHNEKHNITPQTIVKPI 590
           E      E+R+ L           P  +  P+
Sbjct: 357 EAHFRLIEKRQGLSLPRERVEGFEPTEVAPPV 388