Pairwise Alignments

Query, 646 a.a., excinuclease ABC subunit UvrB from Methanococcus maripaludis S2

Subject, 1159 a.a., transcription-repair coupling factor from Magnetospirillum magneticum AMB-1

 Score = 46.6 bits (109), Expect = 6e-09
 Identities = 24/85 (28%), Positives = 40/85 (47%)

Query: 163 ELKVGEKIKRSDIIEKLVDIQYERNDMELVPGRFRVKGDTLDIIPGYQDDILRVEMFGDE 222
           + + G ++    +I  L    Y R D  + PG + V+G  +D+ P    + LR++ FGDE
Sbjct: 131 DARKGSRLSMDKLIGFLSKNGYVRADTVMEPGEYAVRGGIVDLYPPGSAEPLRLDFFGDE 190

Query: 223 IDRIYELDPKNMSKKHEIDSFYMYP 247
           ID +   DP +      +  F   P
Sbjct: 191 IDSVRSFDPMSQRTTGPMAGFVCRP 215



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 454 RLAEELTEYLAKRNVKARYLHSDIDTIERTEIIRNLRLGKFDCLVGINLLREGLDIPEVG 513
           R+AE L + + +  VK    H  +   +  E++      ++D L+  N++  G+D+P V 
Sbjct: 837 RVAERLAKLVPE--VKTAVAHGRLAPADLEEVMVAFGEKQYDVLLSTNIIESGIDMPSVN 894

Query: 514 FVGILDADKEGFLRNDKSLIQTIGRAAR 541
            + I  AD  G       L Q  GR  R
Sbjct: 895 TLIIHRADMFGL----GQLYQLRGRVGR 918