Pairwise Alignments

Query, 578 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 1159 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 77.8 bits (190), Expect = 2e-18
 Identities = 127/556 (22%), Positives = 214/556 (38%), Gaps = 107/556 (19%)

Query: 89  AYTGINAGLLIIVADDPSMHSSQNEQDTRYYGIFSKIPVLEPSDSQECKDFVKLGLEISE 148
           A T  + G+L ++ DD +  SS     + ++ +   IPVL P+  QE  D+   G  +S 
Sbjct: 132 AGTSRHGGVLALMGDDHTCESSTTAHQSEFHFVDVMIPVLNPAGVQEIIDYGLYGWALSR 191

Query: 149 KFDTPVILRLSTRVSHSQSLVELEEKEKIELKPYDYNPSKYVSAPANAKKR----RIFIE 204
              T V L+       S  +V+    +++ ++P       +   P     R     I  E
Sbjct: 192 FAGTWVGLKAVKDTIESTGIVD-GRLDRVRIEP----ALGFAMPPGGLNIRLGDTPIAQE 246

Query: 205 ERLKELS-----NFADSSDVNKI---EYANKKIGIITSGVAYNYAKEAVSDAS------- 249
           ERL+E       +F  ++ +N+      A  +IGI T G +Y   + A+ +         
Sbjct: 247 ERLQEFKRDAVLHFLRANRLNRFITSGGARPRIGIATVGKSYLDVRLALDELGIDEVRAN 306

Query: 250 -----FLKFGMSYPLPEEKIKEFVQNCDKVYVFEELEPIFEQKIRSMGLNV------IGK 298
                  K    +PL  + + EF +  D + V EE   + E ++R            IGK
Sbjct: 307 DLGLRIWKVACPWPLETQGLTEFAKGLDLIMVVEEKRSLIEVQVREELYGTANQPVCIGK 366

Query: 299 E------IFPIVGELSSEII-------------------RNALLNESKIVIEKIEDLPQR 333
           +      +FP+ G L    I                   R A L +++ V+    D+  R
Sbjct: 367 KDEQGRWMFPVKGALDPNDIAIQLGRRLLAYGDIPDIAARVAELEDAQRVLAATSDVATR 426

Query: 334 PPVLCPGCHHRGPFYVLKKLKLHVAGDIGCYTLGGFEPLNAIDTTICMGASIGMAHGFEM 393
            P  C GC H     V + ++ +    IGC+ +     +  +D        +G   G   
Sbjct: 427 IPYFCSGCPHNSSTKVPEGMRAYAG--IGCHYM-----VQWMDRETTGFTQMG-GEGANW 478

Query: 394 ARGKEFAKKSVAV--IGDSTFWHSGVTGLIDIVYNKGHSTVIILDNSITAMTGHQENPST 451
                F+K++     +GD T+ HSG   L      K + T  IL N   AMTG Q++   
Sbjct: 479 IGEASFSKRNHVFQNLGDGTYNHSGYLALRAACAAKVNVTYKILFNDAVAMTGGQKH--- 535

Query: 452 GKTLSGERTNQIDFEALGRSIGINRICVVDAYDLKALEETI---------KEEVNAEEPS 502
                G+ T  +    +    G+ R+ VV     K    T+         ++E++A +  
Sbjct: 536 ----DGDLTVPVIARQVAAE-GVERVVVVTDEPEKYPANTLWPAGLTIHHRDELDAVQRE 590

Query: 503 LIITKRPCVLI-------------KGAKFDFKDYK--IDPKLCTGCKLC-LKAGC----P 542
           L       VLI             K  +F   D +  I+ ++C GC  C +K+ C    P
Sbjct: 591 LAAVPGVTVLIYDQTCASEKRRRRKRGQFPDPDKRVLINERVCEGCGDCGVKSNCVSVQP 650

Query: 543 AISFDGKVAKINDSLC 558
             +  G+  +I+ S C
Sbjct: 651 LETEWGRKREIDQSSC 666