Pairwise Alignments

Query, 578 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 618 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  488 bits (1255), Expect = e-142
 Identities = 269/598 (44%), Positives = 384/598 (64%), Gaps = 29/598 (4%)

Query: 4   LMLGNEAVARGAYEAGVLVATAYPGTPSTEITEHISKYPEINSEWSVNEKVALEVAIGSA 63
           L+ GN+A+ARG +EAG  VA AYPGTPSTEI E +S YP++ +EWSVNEKVA+EVAIG +
Sbjct: 14  LLSGNDAIARGVWEAGAKVAAAYPGTPSTEILESLSLYPDLYAEWSVNEKVAMEVAIGGS 73

Query: 64  IAGARTVVSMKHVGLNVAADPLMTVAYTGINAGLLIIVADDPSMHSSQNEQDTRYYGIFS 123
           ++GAR+  +MKHVGLNVA+D  MTV   G+  GL+I VADD  M SSQNEQD+R++G F+
Sbjct: 74  MSGARSFCAMKHVGLNVASDAFMTVTVAGVIGGLVIAVADDVGMSSSQNEQDSRFWGRFA 133

Query: 124 KIPVLEPSDSQECKDFVKLGLEISEKFDTPVILRLSTRVSHSQSLVELEEKEKIELKPYD 183
            +PVLEP+DSQE  +  K   E+SE ++TPVILRL+TRV H +++V++ EK   ++  + 
Sbjct: 134 HVPVLEPADSQEAYEMAKYAFELSEAYNTPVILRLTTRVCHVKAVVQVGEKVAHDIGGFK 193

Query: 184 YNPSKYVSAPANAKKRRIFIEERLKELSNFADSSDVNKIEYA-NKKIGIITSGVAYNYAK 242
            +  ++V  PANAK        R  +L   A++S +N ++   +K++G +TSG AY + +
Sbjct: 194 SDARRWVMTPANAKGLLPAQIAREGKLQALAEASPMNFLDDGPDKRVGFVTSGPAYMHVR 253

Query: 243 EAVSDASFLKFGMSYPLPEEKIKEFVQNCDKVYVFEELEPIFEQKIRSMGLNVI-GKEIF 301
           E+  DA  LK G +YP+P   +++     + + V EE EP+ EQ++++ GL  I GK++ 
Sbjct: 254 ESFPDAPVLKLGFTYPVPVALVEKLAAQVEHLVVVEETEPLMEQELKAAGLQAIHGKDLL 313

Query: 302 PIVGELSSEIIRNAL---LNE---SKIVIEKIEDLPQRPPVLCPGCHHRGPFYVLKKLK- 354
           P +GEL+  ++  A+   L E         K +  P RPP +C  C H G +Y L +++ 
Sbjct: 314 PRLGELTPNVLIPAIKTFLGEPLPPTTTYPKFDPFP-RPPTMCAACPHMGVYYSLARMRK 372

Query: 355 -LHVAGDIGCYTLGGFEPLNAIDTTICMGASIGMAHGFEMARGKEFAKKS-VAVIGDSTF 412
            + ++GDIGCYTLG   P NA+D+TI MGAS+G+A G + AR +E   K+ VAVIGDSTF
Sbjct: 373 NVQISGDIGCYTLGAGHPWNALDSTISMGASMGIALGMDKARTEETKDKAVVAVIGDSTF 432

Query: 413 WHSGVTGLIDIVYNKGHSTVIILDNSITAMTGHQENPSTGKTLSGERTNQIDFEALGRSI 472
            H G+ GL+DIVYN+G+ TV+ILDN  T MTG Q +  TGK L G+ T ++DF  L  ++
Sbjct: 433 LHMGMQGLLDIVYNRGNVTVLILDNRTTGMTGGQNHAGTGKGLKGDDTPRVDFAKLVEAL 492

Query: 473 GI--NRICVVDAYDLKALEETIKEEVNAEEPSLIITKRPCVLIKGAKFDFKDYKIDPKLC 530
           G+   RI  +D Y L  + +TIK+E    E S+IIT RPCVL +      + YK+  + C
Sbjct: 493 GVKPERISKIDPYVLPVVFKTIKQETAIPEVSVIITDRPCVLSE-FYTKIEPYKVIDEDC 551

Query: 531 TGCKLCLKAGCPAISF---------DGKV-----AKINDSLCVGCGLCKDLCKFSAIV 574
           TGC  C+  GCPAI+          DGKV       I+ ++C GC +C + C   AIV
Sbjct: 552 TGCGNCINVGCPAITVKRSESKVRPDGKVNELKFTTIDTAMCTGCHMCVESCGPKAIV 609