Pairwise Alignments

Query, 198 a.a., class III signal peptide-containing protein from Methanococcus maripaludis S2

Subject, 227 a.a., class III signal peptide-containing protein from Methanococcus maripaludis S2

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 19/201 (9%)

Query: 3   NRGQLSIEMVILVLAVLVSGSYVALDLSKGAFETTAVNDVQESSYCGFTPDFGATSIDKA 62
           ++GQ+SIE+++L+ AVL++G  V++++++  FE   ++DV+E ++  F       S D  
Sbjct: 5   SKGQISIELILLMTAVLLAGILVSVNMTRFTFEGDILSDVREDAFQVF-----EISTDTP 59

Query: 63  LVKLTTGIININPNAAVTNNEFNA--TYTNTTDNTVVTYSLDNVHPNLIK-NYADGTIVK 119
           ++  +    N+    + + N +NA     +T ++T + Y  D     L   +  D +I +
Sbjct: 60  IIVYSLNFSNV--KISPSTNLYNAWLQINDTGNDTYLWYYSDGTFKGLANTSDPDESITE 117

Query: 120 VPLNETWKNFTASNIILRMKSDYVCTINGENVSMESN---CFEITA-PLGSDSFDFQMSA 175
             L        AS+II R  S+    ++ ++  ++ N    FEI A  + ++   + ++ 
Sbjct: 118 ENLVLLPHEGYASDIIFR--SNVPTAMSWDSYEIDFNDIKKFEIIANDVENNPISYSLTH 175

Query: 176 GTG---AGQYYLRLVDQEVTI 193
           G     + Q YL +   EVTI
Sbjct: 176 GDSPETSNQAYLNIKANEVTI 196