Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 597 a.a., K(+)/H(+) antiporter NhaP2 from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 2e-27
 Identities = 97/359 (27%), Positives = 171/359 (47%), Gaps = 25/359 (6%)

Query: 10  ISLLFIIGSF-------IAKLADRIGIPDIPLLLITGLLIGPVLGLISPIYAQTIFSFVG 62
           I+ LF+IG+        ++ L+ R+GIP + ++L  G+L G   G I      T +  VG
Sbjct: 23  INSLFLIGALLVGASILVSSLSSRLGIPILVIILAVGMLAGVDGGGIIFNNYPTAY-LVG 81

Query: 63  TIGLIILLLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFIYALPFTNPIGF 122
            + L ++LL G    R    +  L   L L T+G++I+  ++G+I ++++ L      G 
Sbjct: 82  NLALAVILLDGGLRTRVASFRVALWPALSLATVGVMITTALTGLIAAWLFNLSLIQ--GL 139

Query: 123 IYGAVNCATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIVATTLTLSSLGLSKSVN 182
           + GA+  +TD A +  +     ++ +++ TLE ES  NDP+ +  T   +  +   ++  
Sbjct: 140 LIGAIVGSTDAAAVFSLLGGKGLNERVSATLEIESGSNDPMAVFLTVTLIDMIASGETGL 199

Query: 183 --PILDFVMLAFG-GLALGYVGGKIFEFVVSKDEFGEYIAPLGVGSAMALWFFGEDVAPH 239
              +L  ++  FG G  LG  GG +   +V++      + P+ V  A  L  F    A H
Sbjct: 200 HWSLLGHLLREFGIGTLLGLGGGWLMLQLVNRINLAGGLYPILV-VAGGLVMFSLTNALH 258

Query: 240 FLGYGLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGASIS 299
                 SG++AV + GL +GN    KP  S+  H +      ++ L +I +F+ LG  ++
Sbjct: 259 G-----SGFLAVYLCGLVLGN----KPIRSR--HGILHMLDGMAWLAQIGMFLVLGLLVT 307

Query: 300 LPLLKSFGIYGLLCAIGTLFIARPIGVFIATAIPPVSSLKERIYFALEGPRGVVPAALA 358
              L    +  L  A+  + +ARP+ V  A         +E+ + +  G RG VP  LA
Sbjct: 308 PHDLLPIALPALGLALWMILVARPLSVVAALLPFKAFHGREKGFISWVGLRGAVPIILA 366