Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 421 a.a., Na(+)/H(+) antiporter NhaP from Pseudomonas sp. DMC3

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 30/295 (10%)

Query: 27  IGIPDIPLLLITGLLIGPVLGLIS----PIYAQTIFSFVGTIG---------LIILLLVG 73
           IG+P    +++T LL   +L  +S    P     +   +G I          L  LL  G
Sbjct: 23  IGLPPTIGVMVTALLFSLLLQGLSVLGFPGLEDRVQQLIGQIDFGDLLMNWMLSFLLFAG 82

Query: 74  AFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFIYALPFTNPIGFIY----GAVNC 129
           A  +    L+     +  L T G++I+ ++ G +  +I+AL F   + F+Y    GA+  
Sbjct: 83  ALHVNLNDLRSYRWPIGLLATFGVLIATVVIGSLAFYIFAL-FGWHVSFLYCLLFGALIS 141

Query: 130 ATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIVATT--LTLSSLGLSKSVN-PILD 186
            TDP  ++ +   ++    +  T+  ES+FND   +V  T  L ++ LG + +V+   + 
Sbjct: 142 PTDPIAVLGVLRTANASKPLKTTIVGESLFNDGTAVVVFTVLLGIAQLGETPTVSATAML 201

Query: 187 FVMLAFGGLAL-GYVGGKIFEFVVSKDEFGEYIAPLGVGSAMALWFFGEDVAPHFLGYGL 245
           FV  A GG+   G +G  ++  + S ++       + V   +AL   G  ++       +
Sbjct: 202 FVHEAIGGVLFGGLIGYLVYRMIKSVEQH-----QITVMLTLALVIGGSAMSTEL---HV 253

Query: 246 SGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGASISL 300
           S  +A+ + GL IGN+      N      +  F   L  +   L+F  +G  + L
Sbjct: 254 SAPIAMVVAGLIIGNLGRNLAMNDMTRRYLDGFWELLDDMLNALLFALIGMELLL 308