Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

 Score =  116 bits (290), Expect = 2e-30
 Identities = 89/412 (21%), Positives = 178/412 (43%), Gaps = 16/412 (3%)

Query: 23  PAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGVTFGIGGSSLLSRK 82
           P ++   + +    ++G ++G+ +GT A   ++ +FP     +A  +  G G S L+ + 
Sbjct: 19  PMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIVFFFIALVIGLGAGASVLIGQA 78

Query: 83  LGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADIFPYAKDYYEIIL 142
            G       +   G  ++   ++ V+  ++G +F  P L  LGT  D+   A  Y + ++
Sbjct: 79  WGAQETAMVKAITGATLTLGALVGVVAAVLGSLFARPALQALGTPVDVLDDAVGYAQKMM 138

Query: 143 YGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVF----NMGIKGAAI 198
                    +    L+R        + A++V  ++ ++L P LI  +     MGI+ A  
Sbjct: 139 LIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGLLLTPALIRGWVGLPPMGIQSAVY 198

Query: 199 ATVLSQIIGVIYI---LKHQFGKNTSIKYAMNDFLINLKILKETVFIGASEFAKLIISSI 255
           A ++   + ++++   L+H+       +  +    ++  IL + + IG     ++++ S+
Sbjct: 199 AGLVGNALAMLFLILRLRHKNHVMAPDRELLAALRLDRVILGKVLRIGLPTGLQMVVLSL 258

Query: 256 LLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVGYNYGKGQLNRVSE 315
             ++   L+  +G   A A YG + +I   +  P L I      +     G G+L R+  
Sbjct: 259 SELVILALVNGHGSQ-ATAAYGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLERIGP 317

Query: 316 SIKLALV----GTSGLCLLGFILVMIFPEKFIQIFITDPEVISQGVFATRIFFMFSFLIG 371
            ++  L+     T GL +LG++L        + +FITD            I      + G
Sbjct: 318 ILRTGLLINTCLTGGLIVLGYVL----SHWLLGLFITDDAARVNAEHLLHIMLWSILVFG 373

Query: 372 AQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIWFSFPI 423
            Q  IGG+ ++ G      +IS        +P   +L   FGL G+W +FP+
Sbjct: 374 FQAVIGGIMRASGVVLMPVVISIFCVLCVELPMAYLLNAHFGLEGVWMAFPV 425