Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score =  121 bits (303), Expect = 5e-32
 Identities = 90/420 (21%), Positives = 181/420 (43%), Gaps = 16/420 (3%)

Query: 15  KLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGVTFGIG 74
           K+ +    P ++  ++ +L   ++  ++G+ +G  A   ++  FP     +AF +  G G
Sbjct: 32  KVFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVMFFFIAFIIGLGAG 91

Query: 75  GSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADIFPYA 134
            S L+ +  G  +   A+   G  ++  ++  ++I + G  F  P+L  LGT  D+   +
Sbjct: 92  ASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPPDVLADS 151

Query: 135 KDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVF----N 190
             Y  I+L         + A  ++R  G     +  +++  +I +++ P LI  +     
Sbjct: 152 TRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRGWGGLPQ 211

Query: 191 MGIKGAAIATVLSQIIGVIYI---LKHQFGKNTSIKYAMNDFLINLKILKETVFIGASEF 247
           +G+   A A+VLS  +  I++   L+ +          M +  I  ++LK  + IG    
Sbjct: 212 LGVASGAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLKIGVPTG 271

Query: 248 AKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVGYNYGK 307
            ++I+ ++  ++  +++  YG   A A YG + ++   +  P + I      +     G 
Sbjct: 272 VQMIVVALAEVVLLSMVNSYGSS-ATAAYGAVNQVVAYVQFPAISIAITASILGAQAIGA 330

Query: 308 GQLNRVSESIKLAL----VGTSGLCLLGFILVMIFPEKFIQIFITDPEVISQGVFATRIF 363
           G+ NR+    K AL    V T GL +LG+    +F    +  FIT   V+        I 
Sbjct: 331 GRANRLGAIAKTALLMNVVLTGGLVVLGY----LFSRHLMAFFITSEPVLEIAQTLLHIM 386

Query: 364 FMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIWFSFPI 423
                + G    + G+ ++ G      +IS        +P    +    GL+GIW ++P+
Sbjct: 387 LWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIWIAYPV 446