Pairwise Alignments

Query, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

Subject, 482 a.a., Metallo-beta-lactamase family protein, RNA-specific from Sphingobium sp. HT1-2

 Score =  149 bits (376), Expect = 3e-40
 Identities = 121/457 (26%), Positives = 208/457 (45%), Gaps = 40/457 (8%)

Query: 166 RRIHRDVRLRDDSWVRTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFD 225
           R    D+  R    +  +FLG S  V  +       E++I+VD G+     D +      
Sbjct: 17  REARIDLAKRPADGLGVAFLGASGTVTGSRYLVDDGETQIVVDSGLFQGPRDLRRLNWAS 76

Query: 226 APEFSIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEK 285
            P   + ++  V++THAHLDH G +P + R G+DG V  T+ T  L  LL  D   + EK
Sbjct: 77  IPP-EVADVGQVLLTHAHLDHSGALPRMARLGWDGTVLATRATAALCELLLPDSGHLQEK 135

Query: 286 E---------GKNVP----YSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGS 332
           +          ++ P    Y+  D +  ++   P+++G    +   I++  H AGHILG+
Sbjct: 136 DAEFANQHGFSRHQPALPLYTQADARLALQLFRPIEFGAWHAVTDGIRVRYHRAGHILGA 195

Query: 333 AIAHCHVGDGLYNVAYTGDIKFEASRLL---EPAVCQFPRLETLIIESTYGGYDDVLPER 389
             A   +      + ++GDI      ++   EP      R + +++ESTYG   D   E+
Sbjct: 196 --ASIEIDWKGRTILFSGDIGRYGDAVMKDPEPPA----RADYVLVESTYG---DRRHEQ 246

Query: 390 DETEKEFLRVIAETIARKGKAIIPVFGIGRAQELMLVLEEGYNQG-IFNAPVYLDG-MIW 447
            +  K     +   + R G  +IP F +GR Q L+        QG + + P++LD  M  
Sbjct: 247 VDPTKTLGDHVERCVERGGTVVIPAFAVGRVQSLLYHFSRLRAQGRLRDIPIFLDSPMAI 306

Query: 448 EATAIHTAYPEYLSKNMRNRIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSG 507
            A+ +     +++ ++   R   E        V   V+   + + +  +  P +I++ SG
Sbjct: 307 NASGLMC---DFMDEHRLARAECEA----ACSVAHYVREVEESKELTANPAPKVIISASG 359

Query: 508 MLSGGPSVEYFKNLADDEKNSIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGRSKAVKVNL 567
           M +GG  + + K  A D KN I+F G+Q+ GT G  +  G + I + G     + + V  
Sbjct: 360 MATGGRVLHHLKRFAPDGKNLILFSGFQAAGTRGAAMIGGARTIKIHG-----EYIPVEA 414

Query: 568 SVHTLEGFSGHSDRKQLIKYLRKLKPIPDRILTVHGE 604
            V  L   S H+D  +L+++L  L+  P  +   HGE
Sbjct: 415 EVANLTMLSAHADSDELMRWLGSLQEPPRHVYVTHGE 451