Pairwise Alignments

Query, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

Subject, 452 a.a., Metallo-beta-lactamase family protein, RNA-specific from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (423), Expect = 9e-46
 Identities = 123/438 (28%), Positives = 214/438 (48%), Gaps = 36/438 (8%)

Query: 183 SFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVVTHA 242
           S LGG+  V  +       ++R+LVDCG+   +++ +   +++        IDAVV+THA
Sbjct: 5   SSLGGAGTVTGSKHLLTHGQTRLLVDCGLFQGLKNLREL-NWEPLSVDPRSIDAVVLTHA 63

Query: 243 HLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKE---------GKNVP-- 291
           HLDH G++P L + G+ G +Y T  TR +  L+ KD   + EK+          K+ P  
Sbjct: 64  HLDHSGYLPKLVKDGFAGSIYSTPATRAVAELILKDSAHLQEKDADFANRKEFSKHHPAL 123

Query: 292 --YSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNVAYT 349
             Y  ++ +   +  +P+    +  +     L +  AGHILG++ A   +      + ++
Sbjct: 124 PLYGVREAERAFQAFVPVPSHKSVALPGDASLLLRGAGHILGASTAQIDIAG--RRIVFS 181

Query: 350 GDI-KFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKG 408
           GD+ +++   + +P     P  + ++IESTYG   D   E  +  +    V+  T+ R G
Sbjct: 182 GDLGRYDDPVMNDPE--PVPEADYVVIESTYG---DRRHEVADPVEALGAVVERTVKRGG 236

Query: 409 KAIIPVFGIGRAQELMLVLEEGYNQG-IFNAPVYLDG-MIWEATAIHTAYPEYLSKNMRN 466
             +IP F +GRAQ L+  L +    G + N PVYLD  M   A+ +   YP+      R 
Sbjct: 237 TVVIPAFAVGRAQSLIYHLWQLKESGRLRNLPVYLDSPMAGSASQLLHDYPKDHKLKAR- 295

Query: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEYFKNLADDEK 526
                 D          V++  + + +  +  P +I++ SGM +GG  + +      D +
Sbjct: 296 ------DYEAACGAVTYVRDVEESKALSANRFPKVIVSASGMATGGRVLHHLAAFGTDHR 349

Query: 527 NSIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGRSKAVKVNLSVHTLEGFSGHSDRKQLIK 586
           N+I+F G+Q+ GT GR + +G +E+ + G     + V V   V  L   S H+D ++L++
Sbjct: 350 NTILFSGFQAAGTRGRSLLQGAQEVKIHG-----QWVPVRAEVAELPMLSAHADSQELLR 404

Query: 587 YLRKLKPIPDRILTVHGE 604
           +L   +  P R+  VHGE
Sbjct: 405 WLGGFRRAPRRVFIVHGE 422