Pairwise Alignments

Query, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

Subject, 555 a.a., metal dependent hydrolase from Agrobacterium fabrum C58

 Score = 55.8 bits (133), Expect = 5e-12
 Identities = 109/443 (24%), Positives = 166/443 (37%), Gaps = 73/443 (16%)

Query: 185 LGGSREVGRT-CLYHQTPESR---ILVDCGINIAVED----EKAFPHFDAPEFSIEEIDA 236
           LGG  E+G    LY   PES+   I+VDCG+  A  D    +   P         + +  
Sbjct: 12  LGGVGEIGMNLALYGYGPESKRQWIMVDCGVTFAGPDLPGVDLVLPDISYIAEQKKNLKG 71

Query: 237 VVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKNVPYSSKD 296
           +++THAH DH G +  L+  G + PVY +  T  +  L  K   + T  E     + + D
Sbjct: 72  IIITHAHEDHYGAMNDLWP-GLNVPVYASPFTAGM--LEAKRAYEGTRAEIPVTIFKAGD 128

Query: 297 IKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNVAYTGDIKFEA 356
             N     I    GV   I   + L +                   L NV +TGD K + 
Sbjct: 129 RINVGPFEIEA-VGVNHSIPEPMSLIIRTP----------------LGNVIHTGDWKIDE 171

Query: 357 SRLLEPAV--CQFPRLE-----TLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKGK 409
           +  L P     +F  +       L+ +ST    D V P   E   E LR I E  + +G+
Sbjct: 172 APSLGPLTDEARFRAIGEEGVLALMCDSTNALRDGVSPSEHEV-SEGLRQIIE--SAEGR 228

Query: 410 AIIPVF--GIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRNR 467
             +  F   +GR + +    E                   E   + ++    ++ +    
Sbjct: 229 VAVTTFSSNVGRIRSIAQAAEAAGR---------------EVLLLGSSLKRVVNVSQDLG 273

Query: 468 IFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEYFKNLADDEKN 527
           I  EG  PFL+E         D    +  D   +ILT S    G P     K L+ DE  
Sbjct: 274 IM-EGIKPFLAE---------DEYGYIPRDRVVVILTGS---QGEPRAALAK-LSRDEMR 319

Query: 528 SIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGR-SKAVKVNLSVHTLEGFSGHSDRKQLIK 586
           ++      +     R I    K I +  KNG   + V +      L   SGH  R +L++
Sbjct: 320 NVALASGDTVVFSSRAIPGNEKAI-IEIKNGLIEQGVHIVTDNEALVHVSGHPRRNELLR 378

Query: 587 YLRKLKPIPDRILTVHGEVSKCI 609
                K  P  ++ VHGE +  +
Sbjct: 379 MYEWTK--PQILVPVHGEAAHLV 399