Pairwise Alignments

Query, 433 a.a., NCS2 family permease from Methanococcus maripaludis S2

Subject, 427 a.a., Pyrimidine permease from Variovorax sp. SCN45

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 53/308 (17%)

Query: 103 ALGAVFISGILFILL--TLTKIRT-WIFDAIPDALKYGTAVGIGLFIAFIGLKSAGVIVA 159
           ALG +   G+++IL+   +  I T WI   +P  +        G  +A IGL  A V + 
Sbjct: 109 ALGGIVACGVVYILIGALVQAIGTGWIERFMPPVVT-------GAVVAVIGLNLASVPIK 161

Query: 160 NEATLVGLGNVLSPATFLALFGLFA--TAAMMARKVTGAILWGIILTAVI------GMGL 211
           N A      + +   TFL + GL A  T  M+ R +   IL G+IL  V+      GMGL
Sbjct: 162 NMAAS-NFESWMQAVTFLCV-GLVAVFTRGMLQRLL---ILVGLILATVVYAVLTNGMGL 216

Query: 212 GVSALPAGL-----VAMPPSLAPTLMQMDVMGALSFGLINIILAFFFVDLFDTLGTLSAL 266
           G     +G+     V +P   AP      ++         +I     + + + LG L A+
Sbjct: 217 GKPVDLSGIANAAWVGLPTFTAPVFTANAML---------LIAPVAIILVAENLGHLKAV 267

Query: 267 SSQAGYMKDGKLPKAEKALMSDSVATAVGAALGTSTVTSYVESASGIGLGGRTGFVSV-- 324
           ++  G   D  + +A    + D +AT V  + G + VT+Y E+   IG+   T   S   
Sbjct: 268 TAMTGRNLDAYMGRA---FIGDGIATVVSGSAGGTGVTTYAEN---IGVMAATRIYSTAV 321

Query: 325 -VVAALFLLSIFFSP----FVAAIPAYATAPALIIVGALMISAIKRIDLD---DITESVP 376
            VVAAL  L + FSP     + AIP        I+V  L+  A  +I +D   D +++  
Sbjct: 322 FVVAALIALVLGFSPKFGALIQAIPLPVMGGVSIVVFGLIAIAGAKIWVDNKVDFSQNKN 381

Query: 377 AFIALITI 384
             +A IT+
Sbjct: 382 LIVAAITL 389