Pairwise Alignments

Query, 433 a.a., NCS2 family permease from Methanococcus maripaludis S2

Subject, 445 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  395 bits (1014), Expect = e-114
 Identities = 199/429 (46%), Positives = 285/429 (66%), Gaps = 2/429 (0%)

Query: 5   LARYFGFEEHKTNFKVETMAGVTTFMTMAYIIFVNPSILSLAGMDFGAVMVATCISAALG 64
           L R F   EH T  + E +AG TTF+TM YI+FVNP IL +AGMD  AV V TC+ AA G
Sbjct: 15  LERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFG 74

Query: 65  TFIMGVYAKYPFALAPGMGLNAFFTFGVVMGMGLSWQTALGAVFISGILFILLTLTKIRT 124
           + +MG++A  P ALAP MGLNAFF F VV  MGL WQ  +GA+F   I  +LLT+ ++R 
Sbjct: 75  SIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFWGAIGLLLLTIFRVRY 134

Query: 125 WIFDAIPDALKYGTAVGIGLFIAFIGLKSAGVIVANEATLVGLGNVLSPATFLALFGLFA 184
           W+   IP +L+ G   GIGLFI  +GLK+AGVIVAN  TLV +GN+ S +  L + G F 
Sbjct: 135 WMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGNLTSHSVLLGILGFFI 194

Query: 185 TAAMMARKVTGAILWGIILTAVIGMGLGVSALPAGLVAMPPSLAPTLMQMDVMGALSFGL 244
            A + +R +  A+L  I++T ++G  LG      G+V+ PPS+   +  +D+ G+ + GL
Sbjct: 195 IAILASRNIHAAVLVSIVVTTLLGWMLG-DVHYNGIVSAPPSVMTVVGHVDLAGSFNLGL 253

Query: 245 INIILAFFFVDLFDTLGTLSALSSQAGYMKD-GKLPKAEKALMSDSVATAVGAALGTSTV 303
             +I +F  V+LFD+ GTL  ++ +AG   + GK P+ ++AL  DS+++  G+ +GTS+V
Sbjct: 254 AGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSV 313

Query: 304 TSYVESASGIGLGGRTGFVSVVVAALFLLSIFFSPFVAAIPAYATAPALIIVGALMISAI 363
           T+Y+ES+SG+ +GGRTG  +VVV  LFLL IF SP    +P YA A ALI VG LM S++
Sbjct: 314 TAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSL 373

Query: 364 KRIDLDDITESVPAFIALITIPLTYSIATGLQLGFIFYPLIKIIAGRSKEVHPIVYLLAI 423
            R++  D+TESVPAFI  + +P ++SI  G+ LGFI Y ++KI  GR +++ P V ++A+
Sbjct: 374 ARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVAL 433

Query: 424 IFAARFVYI 432
           +F  + V+I
Sbjct: 434 LFILKIVFI 442